PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102555.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family G2-like
Protein Properties Length: 281aa    MW: 32540.2 Da    PI: 6.5067
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102555.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like76.72.9e-24104169155
         G2-like   1 kprlrWtpeLHerFveaveqLGGse...........kAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r++Wt++LHe+Fve+v++LGG+e           +AtPk+il+lm+ + Lt+ h+kSHLQkYR+
  XP_010102555.1 104 KQRIKWTEDLHEQFVECVNRLGGAEmenidqafyyiEATPKNILKLMNKNMLTIFHIKSHLQKYRT 169
                     79*********************975555555555569***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.1E-24102170IPR009057Homeodomain-like
SuperFamilySSF466894.39E-13102169IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-17104170IPR006447Myb domain, plants
PfamPF002493.8E-7108168IPR001005SANT/Myb domain
PfamPF143794.8E-12197241IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MNSQQSYSKH QNCDLPNFFS EFLELEGNSF TTIDHNEADD HHHDQQSQKS PKSSAQDFTT  60
SRAVGTEFPI FSDGHHHDYI LDHQRNGVVF YTSSKEAPRI SANKQRIKWT EDLHEQFVEC  120
VNRLGGAEME NIDQAFYYIE ATPKNILKLM NKNMLTIFHI KSHLQKYRTS KHIADYKKEK  180
SENIATSDGT LDMKSGMHIK EALQNVNNRL HEQLEIQHNL QLLIEEQGKQ MKMMLQQQQK  240
TNNNLLMKSM HITADSQMQD DPCNSFSTAE CSGSYHFSNI I
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102555.10.0Myb family transcription factor APL
SwissprotQ8GUN51e-36PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLW9RJ100.0W9RJ10_9R
STRINGBra028717.1-P2e-49(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.17e-40G2-like family protein